ArrayFusion - a web application for multi-dimensional analysis of CGH, SNP and microarray data
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Example Datasets
 
1. Combine CGH and expression array data into Affymetrix Integrated Genome Browser
Input:
  • CGH_down.txt,  CGH_up.txt  (cytological locations)
    		•
  • expression_down.txt,  expression_up.txt  (HG-U133A probesets)
    		•
    Output:
  • CGH_down.egr,  CGH_up.egr
    		•
  • expression_down.egr,  expression_up.egr
    		•
    Screenshot from Affymetrix IGB:

    2. Batch convert Affymetrix expression array data to find gene clusters
    Input:
  • KS_133A_down.txt,  KS_133A_up.txt  (HG-U133A probesets)
    		•
    Output:
  • KS_133A_down.egr,  KS_133A_up.egr
    		•
    Screenshot from Affymetrix IGB:
     


    Services & Applications
    ArrayFusion 1.5.7
    SET 1.0.3
    easyExon 1.0.4
    MFSelector 1.0.0



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